CSB.DB: AthCoR@CSB.DB

The Comprehensive Systems Biology Project (CSB)

	AthCoR@CSB.DB - The A.thaliana Co-Response Database -
	Hosted at Max Planck Institute of Molecular Plant Physiology

Databases:

Associated DB | Transcriptome DB | Metabolome DB | Co-Response DB

AthCoR Navigation

Transcript Co-Response Single Gene Q. Multiple Gene Q. Intersection Gene Q. S.cerevisiae: SceCoR E.coli: EcoCoR Databases Downloads

CSB.DB Service CSB.DB Contact CSB.DB Disclaimer

Last Modified: 2005-07-25 © CSB.DB 2003-2005

AthCoR@CSB.DB - The A.thaliana Co-Response Database

The AthCoR@CSB.DB contains transcriptional co-responses (gene-gene correlations) of the eukaryotic plant model organism Arabidopsis thaliana. By scanning for the best co-responses among changing transcript levels these databases allows to infer hypotheses on the functional interaction of genes.

Ref. | Info. |

You can query the AthCoR@CSB.DB by choosing the appropriate category on the list below.

Transcriptome: Transcript Co-Response Queries

Transcript Co-Response


	Transcriptome: Transcript Co-Response Queries
	Info. \| Help \|

	•	Single Gene Query (sGQ)
		sGQ: allows to pre-define a gene and to retrieve genes associated by co-response
	•	Multiple Gene Query (mGQ)
		mGQ: allows pre-definition of a set of genes and returns the co-response between these genes
	•	Intersection Gene Query (isGQ)
		isGQ: allows retrieval of genes which exhibit common co-response to at least two pre-define genes

Contact
For suggestions and questions feel free to contact the CSB.DB curator.

Co-Response Module(affy2agi)
Update 2005-07-25 A.thaliana: Affymetrix to AGI Assignments updated. New co-response data matrices will be available soon... query data or matrix info.

Transcriptome Module(affy2agi)
Update 2005-07-25 A.thaliana: Affymetrix to AGI Assignments updated. AffymetrixID to AGI code converter will be available soon... query data

Metabolome Module
Update 2005-07-25 GMD@CSB.DB - The Golm Metabolome Database: access to custom mass spectra libraries, metabolite profils and related information... get overview

Browser Support
Requirements Minimal resolution for optimal view: 1024x768 (without favorites)! Web browser of the sixth generation required, e.g. MS IE 6.0. Javascript must be enabled... more